BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026H09SP1|AL428631
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1732 0.0
>3x_Contig1800
Length = 38778
Score = 1732 bits (871), Expect = 0.0
Identities = 881/885 (99%), Gaps = 1/885 (0%)
Strand = Plus / Plus
Query: 1 aaaattgaataaatgacagaccctatatacaaattataagtaagtacctaccattcttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aaaattgaataaatgacagaccctatatacaaattataagtaagtacctaccattcttat 455
Query: 61 attagaatatgtgaaagtagcaacaaagttataagaaagctagaacaagagcgacaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 attagaatatgtgaaagtagcaacaaagttataagaaagctagaacaagagcgacaaaag 515
Query: 121 gggaaatagatagtttgcttgccttaccttcatacattgtttggaagacagcagatgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gggaaatagatagtttgcttgccttaccttcatacattgtttggaagacagcagatgttt 575
Query: 181 gactgctgatggtcacaatggatacttgtggtagaggggtttctgcaggagatgttgtcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gactgctgatggtcacaatggatacttgtggtagaggggtttctgcaggagatgttgtcg 635
Query: 241 atgaggatgactctgagcctgtggatgtattaattgattgatagttggtggaatgtgttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 atgaggatgactctgagcctgtggatgtattaattgattgatagttggtggaatgtgttg 695
Query: 301 caacctgttcgctaactgaagttttagaaacttctggagtccctggtgtggaagcttctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 caacctgttcgctaactgaagttttagaaacttctggagtccctggtgtggaagcttctg 755
Query: 361 gggtattaatgctgctgcttgaagaagaaacagtagaccatccggattgasatgatggac 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 756 gggtattaatgctgctgcttgaagaagaaacagtagaccatccggattgagatgatggac 815
Query: 421 caactgggttgccagctgattcagtggtttgtmatgatgtcacacttgtagttggcactg 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 816 caactgggttgccagctgattcagtggtttgtaatgatgtcacacttgtagttggcactg 875
Query: 481 atgtagtaccctcttctgacgagccaacaacaacactagagcttgaacttggtggacatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 atgtagtaccctcttctgacgagccaacaacaacactagagcttgaacttggtggacatg 935
Query: 541 atgttgtgtatgtcatcactgtaccggagatagtagtggtaaccgtgctcaaagtataag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 atgttgtgtatgtcatcactgtaccggagatagtagtggtaaccgtgctcaaagtataag 995
Query: 601 cctctgaagatggaacaccctccgatgtcactacatctgtactagagctcgaacttaatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 cctctgaagatggaacaccctccgatgtcactacatctgtactagagctcgaacttaatg 1055
Query: 661 gacatgttgttgtgtaggttgtcactgttccagagatggttgtagtaaccgtgcttaggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 gacatgttgttgtgtaggttgtcactgttccagagatggttgtagtaaccgtgcttaggg 1115
Query: 721 tgtatgcacttcctgaaggaacaatatcagtwgtcgaacttccttcttcggaagcagact 780
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1116 tgtatgcacttcctgaaggaacaatatcagtagtcgaacttccttcttcggaagcagact 1175
Query: 781 ttgcaatagatgttgttgatcccgacactacggtgaacgaatccgatgtctgtgtttgtg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1176 ttgcaatagatgttgttgatcccgacactacggtgaacgaatccgatgtctgtgtttgtg 1235
Query: 841 tttgttygtggaggttcagcaatagttgttgaacttgaagccgct 885
|||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1236 tttgtt-gtggaggttcagcaatagttgttgaacttgaagccgct 1279
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6044
Number of Sequences: 1807
Number of extensions: 6044
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)